Erkut İnan İşeri

Dr Erkut İnan İşeri

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EDUCATION

Ph.D. METU, Department of Physics 2004
M.Sc. METU, Department of Physics 1998
B.Sc. METU, Department of Physics 1996

WORK EXPERIENCE

2005-present: NEU, Faculty of Engineering; Assist. Prof. Dr
2004-2005: NEU, Faculty of Engineering; Dr
2008 -2009: NEU, Department of Electrical and Electronic Engineering; Vice Chairperson
2005 – 2011 & Sep, 2014 –2016: NEU, Faculty of Engineering; Physics courses Coordinator
1999-2004: Middle East Technical University, Teaching Assistant

Publications in Process

Erkut I. Iseri, Kaan Uyar, Umit Ilhan, “Forecasting Measles in European Union by using Adaptive Neuro-Fuzzy Inference System”, Cyprus Journal of Medical Sciences (Accepted)

PUBLICATIONS IN INTERNATIONAL REFEREED JOURNALS (IN COVERAGE OF SSCI/SCI-EXPANDED AND AHCI):

Umit Ihan, Kaan Uyar, Erkut I Iseri, “Web Accessibility of the Cyprus Island Higher Education Institution Libraries”, Proceedings of the 7th International Conference on Theory and Practice in Modern Computing (TPMC 2018), pp. 121-128, 18-20 July 2018, Madrid, Spain.

Erkut I. Iseri, Kaan Uyar, Umit Ilhan, “Forecasting Measles in European Union by using Adaptive Neuro-Fuzzy Inference System”, Second International Biomedical Engineering Congress 2018 (IBMEC-2018), Abstract book p.91, 24-27 May 2018, TRNC

E. İ. İşeri, K. Uyar and Ü. İlhan, “Accessibility of the Cyprus Island Municipal Websites”, 9th Int. Conference on Computational Intelligence and Communication Networks (CICN 2017), Pages: 72 – 76, 16-17 Sept. 2017, IEEE Xplore: 19 March 2018. DOI: 10.1109/CICN.2017.8319359

E. İ. İşeri, K. Uyar and Ü. İlhan, “The Accessibility of Cyprus Islands’ Higher Education Institution Websites”, Procedia Computer Science, 120, 967-974, 2017. 

H. Yıldırım,  E. İ. İşeri and D. Gülen, “A quantitative analysis of exciton superhyperchromism in porphyrin J-/H-aggregates”, Chem. Phys. Lett. 391, 302-307 2004.

E. İ. İşeri and D. Gülen, “Chlorophyll transition dipole moment orientations and pathways for flow of excitation energy among the chlrophylls in the major plant antenna LHCII”, Eur. Biophys. J., 30, 344-353, 2001.

E. İ. İşeri, D. Albayrak and D. Gülen, “Electronic excited states of the CP29 antenna complex of green plants: a model based on exciton calculations”, J. of Biol. Phys., 26, 321-339, 2000.

E. İ. İşeri and D. Gülen, “Electronic excited states and excitation transfer kinetics in the Fenna-Matthews-Olson protein of the photosynthetic bacterium Prosthecochloris aestuarii at low temperatures”, Eur. Biophys. J., 28/3, 243-253, 1999.

PUBLICATIONS IN NATIONAL REFEREED JOURNALS:

· E. İ. İşeri and D. Gülen, “Absorption and linear dichroism of the Fenna-MatthewsOlson pigment-protein complex of Prosthecochloris aestuarii: An exciton model”,
Doğa-Tr. J. of Physics, 21, 1129-1140, 1997.

BULLETING PRESENTED IN INTERNATIONAL ACADEMIC MEETINGS AND
PUBLISHED IN PROCEEDINGS BOOKS:

· E. İ. İşeri, H. Yıldırım, and D. Gülen, “Antenna size dependent hyperchromism of the Qy absorption band of linear and tubular BChl c aggregates”, ESF “Femtochemistry and Femtobiology” Ultra Programme Workshop on Femtosecond Dynamics in Photosynthetic Light-harvesting Complexes, October 9-13 2002, Belek, Antalya, Turkey.
· E. İ. İşeri, M. Wendling, M. A. Palacios, R. van Grondelle, T. J. Aartsma, S. I. E. Vulto, D. Gülen and H. van Amerongen, “Spectroscopic measurements and spectral simulations of the FMO protein from Chlorobium tepidum”, ESF “Femtochemistry and Femtobiology” Ultra Programme Workshop on Femtosecond Dynamics in Photosynthetic Light-harvesting Complexes, October 9-13 2002, Belek, Antalya, Turkey.
· H. van Amerongen, M. Wendling, M. A. Przyjalgowski, M. A. Palacios, R. van Grondelle, T. J. Aartsma, S. I. E. Vulto, E. İ. İşeri, D. Gülen., “The relation between structure and polarized spectroscopy of the FMO complex of Prosthecochloris aestuarii and Chlorobium tepidum “, EMBO Workshop on Green and Heliobacteria, April 19-23, 2002, Passau, Germany.

· A.S. Taisova, D. Gülen and E. İ. İşeri, V.A. Drachev, T.A. Cherenkova, Z.G.Fetisova, “Antenna-size dependent hyperchromism of the Qy absorption band of the chlorosomal oligomeric bacteriochlorophyll (BChl) c antenna of the green bacteria, Satellite Meeting on the Evolution of Photosynthesis, XIIth International Congress of Photosynthesis, August 25-28 2001, Heron Island, Australia.
· Z.G.Fetisova, A.S. Taisova, D. Gülen, E. İ. İşeri, “Antenna-size dependent hyperchromism of the Qy absorption band of the chlorosomal oligomeric bacteriochlorophyll c antenna of the green bacterium Chloroflexus aurantiacus, July 2001, Voronez, Russia.
· A.S. Taisova, D. Gülen and E. İ. İşeri, V.A. Drachev, T.A. Cherenkova, Z.G.Fetisova, “Antenna-size dependent hyperchromism of the Qy absorption band of the chlorosomal oligomeric bacteriochlorophyll (BChl) c antenna of the green bacteria, XIIth International Congress of Photosynthesis, August 18-23 2001, Brisbane, Australia.
· E. İ. İşeri and D. Gülen, “Structure-spectroscopy relationship in the LHCII: a model study on the chlorophyll transition dipole moment orientations and flow of excitation energy among the chlorophylls”, XIIth International Congress of Photosynthesis, August 18-23 2001, Brisbane, Australia.
· E. İ. İşeri and D. Gülen, “Structure-spectroscopy relationship in the LHCII: a model study on the chlorophyll transition dipole moment orientations and flow of excitation energy among the chlorophylls”, LHC2001, Satellite Workshop to the XIIth International Congress of Photosynthesis, August 15-18 2001, Surfers Paradise, Australia.
· E. İ. İşeri, D. Albayrak and D. Gülen, “Chlorophyll transition dipole moment orientations and pathways for flow of excitation energy among the chlrophylls in CP29 and LHCII”, 1 st General Meeting of the ESF/ULTRA Programme, October 23-25 2000, Coimbra, Portugal.
· E. İ. İşeri, D. Albayrak and D. Gülen, “Electronic excited states of the CP29 and LHCII antenna complexes of green plants”, Photophysics and Photochemistry 2000, October 18-21 2000, Costa do Estoril, Portugal.
· E. İ. İşeri and D. Gülen, “Electronic excited states and excitation transfer kinetics in the Fenna-Matthews-Olson complexes of photosynthetic green sulphur bacteria at low temperatures”, Colloquium Spectroscopicum Internationale XXXI, September 5-10 1999, Ankara, Turkey.
· E. İ. İşeri and D. Gülen, “Electronic excited states and excitation transfer kinetics in the Fenna-Matthews-Olson complexes of photosynthetic green sulphur bacteria at low temperatures”, Colloquium Spectroscopicum Internationale XXXI, September 5-10 1999, Ankara, Turkey.
· E. İ. İşeri and D. Gülen, “Low-temperature excitation transfer in the FMO complex. Simulations”, XIth International Congress on Photosynthesis, August 17-22 1998, Budapest, Hungary.

· E. İ. İşeri and D. Gülen “Low-temperature electronic excitation transfer in the FMO complex. Simulations”, ESF International Workshop on Light-Harvesting Systems, August 14-16 1998, Tata, Hungary.
· E. İ. İşeri, H. van Amerongen and D. Gülen, “Excited state structure and subpicosecond excitation dynamics in FMO complex from the green photosynthetic bacterium Prosthecochloris aestuarii: simulations of the absorption difference spectra at low temperatures”, European Science Foundation Workshop on Green and Heliobacteria,
August 31 -September 4 1997, Urbino, Italy.
· E. İ. İşeri and D. Gülen, in: Photosynthesis: Mechanisms and Effects, vol. I, pp. 181 -184, G. Garab and J. Pusztai (eds.), “Low-temperature excitation transfer in the  FMO complex. Simulations”, Kluwer 1998.

Physics Laboratory Manual and work book Prepared and published

G. Buğrahan and E. İ. İşeri, “Physics Laboratory manual and work book”, Faculty of Engineering, NEU, 2005.

 

 

RESEARCH EXPERIENCE:

Research assistant in the Physics Department of Middle East Technical University

Developed various computer programs, based on exciton physics and Förster mechanism. These programs were used to run numerical experiments to investigate the structure-function relationship and energy transfer processes in the various photosynthetic Light-Harvesting complexes including Chlorophyll protein 29 and Light-Harvesting complex II of green plants, Fenna-Matthews-Olson complex of green sulfur bacteria Cholorobium tepidum and Prosthecoclaris aestuarii and Chlorosomes.

VISITING RESEARCHER: 7th May – 7th August, 2001, Vrije University, Amsterdam
Three months visit to Laboratory of the Biophysics Group at the Vrije University, Amsterdam, The Netherlands, under the European Science Foundation (ESF) “Femtochemistry and Femtobiology-ULTRA Programme”, in the year 2001. During this visit, some experimental techniques have been learnt and absorption, linear
dichroism, circular dichroism, polarized fluorescence and fluorescence line narrowing spectral measurements have been performed on a specific light-harvesting complex from green sulphur bacterium. The complex studied was the Fenna-Matthews-Olson complex of Cholorobium tepidum.

 

 

MASTER THESIS TITLE:

· E. İ. İşeri (M.Sc., June 1998, METU), “Electronic excited states and excitation transfer
kinetics in the FMO protein of the photosynthetic bacterium Prosthecochloris aestuarii at
low temperatures”.

 

DOCTORATE THESIS TITLE:

· E. İ. İşeri (Ph.D., June 2004, METU), “Exciton simulations of the optical properties of
several photosynthetic light-harvesting complexes”.

 

 

 

Courses Taught

NEPHAR 103 (Physics, Faculty of Pharmacy)
DHFİZ 110 (Physics, Faculty of Dentistry, in Turkish Language)
FİZ 151 (Physics, Faculty of Health Sciences, in Turkish Language)
PHY 101 (General Physics I, Faculty of Engineering)
PHY 102 (General Physics I, Faculty of Engineering)
EE 216 (Electromagnetic Theory; Faculty of Engineering)
EE 241 (Electrical Material,; Faculty of Engineering)
BME 350 (Radiology Physics; Department of Biomedical Engineering; Faculty of Engineering)
FİZ 101 (General Physics I, Faculty of Engineering, in Turkish Language)
FİZ 102 (General Physics I, Faculty of Engineering, in Turkish Language)
ELE 216 (Electromagnetic Theory; Faculty of Engineering, in Turkish Language)